Information for 3-TTTAAATDTTHANTDA (Motif 21)

G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
Reverse Opposite:
C G A T G T A C G C T A C A T G C G A T C A T G G C T A C G T A G T A C G C T A C G A T C G A T C G A T C G T A G C T A C G T A
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.358
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 25.5bp
Average Position of motif in Background38.9 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTAAATDTTHANTDA
ATTTGAATT--------
 A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAATDTTHANTDA
NNATNAATTGTTTNN---
 A C G T A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTAAATDTTHANTDA
-TTAATGTTTAACC--
 G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAATDTTHANTDA
NNTTTTACATGTANNNT--
 A C G T A C G T A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTAAATDTTHANTDA
-----ATATTTACATA
 G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAATDTTHANTDA
CATTAATTATTCAT---
 A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTTAAATDTTHANTDA
----TTTGTTTACTTA
 G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTAAATDTTHANTDA
GTATCTATTGTTCTTTA-
 A C G T A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAATDTTHANTDA
NNTTTATTGTTCTNNN-
 A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAATDTTHANTDA
CTCATTAATTATGCAT---
 A C G T A C G T A C G T G C A T C G A T G C A T G C T A G C T A G C T A C G A T C A T G G C A T C G A T G T A C G C T A G T A C C G A T C A T G G C T A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T A C G T A C G T