Information for 5-CCWAAAAWGA (Motif 18)

A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T A C G T A G C T C G T A A C T G A C T G
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.857
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif45.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets51.2 +/- 23.8bp
Average Position of motif in Background45.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCWAAAAWGA----
ACGAAAGCGAAAGT
 A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCWAAAAWGA--
TACTGGAAAAAAAA
 A C G T A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCWAAAAWGA--
CCATATATGGNA
 A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCWAAAAWGA
CCATATATGG
 A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCWAAAAWGA---
AGCCGAAAAAAAAAT
 A C G T A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCWAAAAWGA---
ATGCTAAAAATAGAA
 A C G T A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCWAAAAWGA-
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CCWAAAAWGA
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCWAAAAWGA-
-CCAAAAATAG
 A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCWAAAAWGA-
KCCAAAAATAGC
 A C G T A G T C A G T C G C A T T C G A C G T A C G T A C G T A C G A T A C T G C G T A A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C