Information for 8-ATGTAAATGAMTT (Motif 10)

C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T A C G T G T A C C G T A A C G T A C G T G A C T C G T A T A G C C G T A A C G T
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.832
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.5 +/- 26.4bp
Average Position of motif in Background10.2 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATGAMTT
WATGCAAATGAG--
 A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATGAMTT
TATGCWAATBAV--
 A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATGTAAATGAMTT
TTATGCAAATTA---
 A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATGTAAATGAMTT
TTATGCAAATTA---
 A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAATGAMTT
AATATGCAAATTAG--
 A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAATGAMTT
ATATGCAAATNNN--
 A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATGAMTT
TATGCAAAT-----
 A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATGTAAATGAMTT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAATGAMTT
AATATGCAAATT----
 A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATGTAAATGAMTT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A C G T A G T C A A C G T C A T G C G T A G T C A A C G T A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T