Information for 2-TGCTGTHCGTTCC (Motif 5)

A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G G T C A C G T A A G T C A C T G C A T G C G T A G T A C C G T A A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.722e+01
Information Content per bp:1.851
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 27.6bp
Average Position of motif in Background41.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCTGTHCGTTCC
-RSTTTCRSTTTC
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCTGTHCGTTCC
-ASTTTCASTTYC
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCTGTHCGTTCC
-GCTGTG------
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCTGTHCGTTCC
--CTGTTCCTGG-
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTGTHCGTTCC
NGCTN--------
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCTGTHCGTTCC
-AGTTTCAKTTTC
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTGTHCGTTCC
-ACTTTCACTTTC
 A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGTHCGTTCC-----
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGCTGTHCGTTCC
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCTGTHCGTTCC-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T G A T C A G T C C T A G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T