Information for 1-CMSCAGTKWC (Motif 2)

A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
Reverse Opposite:
A C T G C G T A G T C A C T G A A T G C A C G T A C T G A T G C A C G T C T A G
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.834
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif12.86%
Number of Background Sequences with motif292.1
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets47.4 +/- 12.9bp
Average Position of motif in Background50.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CMSCAGTKWC
BRRCVGTTDN
 A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CMSCAGTKWC--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CMSCAGTKWC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CMSCAGTKWC
CAGCTGTT--
 A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CMSCAGTKWC
CCAGCTGTTN-
 A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CMSCAGTKWC
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CMSCAGTKWC
ACAGCTGTTV-
 A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CMSCAGTKWC
NCAACAGCTGTTGC
 A C G T A C G T A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CMSCAGTKWC
CTGAGTCAGCAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CMSCAGTKWC
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C G T C A A T C G A G T C C G T A A T C G A G C T C A G T C G A T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T