Information for 6-AGCCGTTGCC (Motif 8)

C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A G T A C A C T G A C T G A T G C A C G T
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.905
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.0 +/- 25.4bp
Average Position of motif in Background19.7 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGTTGCC
BRRCVGTTDN-
 A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGTTGCC-
CCACCTGTTGCAT
 A C G T A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGCCGTTGCC-
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCCGTTGCC--
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCCGTTGCC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCGTTGCC------
-NCCGTTGCTANGNGN
 C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCCGTTGCC--
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCCGTTGCC
GGCVGTTR--
 C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCCGTTGCC
--CCTTTGTT
 C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGTTGCC---
TGACCTTTGCCCTA
 A C G T C G T A A T C G A G T C A G T C A C T G A C G T C G A T A C T G A G T C A G T C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A