Information for 4-TTYTCCWACACCASAA (Motif 5)

A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A
Reverse Opposite:
A C G T A G C T T A G C A G C T A C T G A C T G G A C T T A C G A G C T C G T A A C T G T A C G G T C A T C G A C G T A C T G A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.669
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.8 +/- 24.5bp
Average Position of motif in Background47.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTYTCCWACACCASAA--
------NWAACCACADNN
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTYTCCWACACCASAA
TTTTCCA---------
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTYTCCWACACCASAA--
-------AAACCACAGAN
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TTYTCCWACACCASAA-
-------AAACCACAGC
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTYTCCWACACCASAA
------NAAACCACAG
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TTYTCCWACACCASAA-
-------ATGCCAGACN
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TTYTCCWACACCASAA-
-------AAACCACANN
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TTYTCCWACACCASAA
----CCAGGAACAG--
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TTYTCCWACACCASAA-
-------AAACCGCAAA
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TTYTCCWACACCASAA------
-----CAAATCCAGACATCACA
 A G C T A C G T A G C T A C G T A G T C G T A C C G A T C T G A A T G C C G T A G T A C A G T C C T G A A T C G C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A