Information for 6-TTAAATATCT (Motif 18)

A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.6 +/- 21.4bp
Average Position of motif in Background50.5 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTAAATATCT----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTAAATATCT
AAATTAATTAATC
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAAATATCT---
GTTAATTANCTCNN
 A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T A C G T A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTAAATATCT
TATGTAAATAT--
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAAATATCT---
ATTAATTANCTCAN
 A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T A C G T A C G T A C G T
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G

PH0051.1_Hoxa4/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTAAATATCT--
GATTATTAATTAACTTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTAAATATCT
TATGTAAATAT--
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAAATATCT
AATTAATTAGT-
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAATATCT--
ANTNATTAATTAACTNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T A C G T A C G T
T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAAATATCT
ATTTGAATT---
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G A T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T