Information for 9-AATCACAAGRCCC (Motif 12)

C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G A G C T A G T C A C G T A C G T A C T G A C G T A C T G C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.856
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.6 +/- 25.1bp
Average Position of motif in Background40.4 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCACAAGRCCC
CAAATCACTG-----
 A C G T A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATCACAAGRCCC
AAACCACANN----
 A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATCACAAGRCCC
NAAACCACAG-----
 A C G T A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATCACAAGRCCC
-GTCACATGAY--
 C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATCACAAGRCCC
AAACCACAGAN---
 A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATCACAAGRCCC
AAACCACAGC----
 A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATCACAAGRCCC
NWAACCACADNN---
 A C G T A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATCACAAGRCCC
AAAAATAACAAACGG-
 A C G T A C G T A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATCACAAGRCCC
AAACCGCAAA----
 A C G T C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATCACAAGRCCC
GGTCACATGAC--
 C G T A C G T A C G A T A G T C C G T A A G T C C G T A G T C A C T A G C T A G A G T C A G T C G T A C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T