Information for 1-CCTGAGCACCTCAGAG (Motif 1)

A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
Reverse Opposite:
A G T C G A C T A G T C C G A T A C T G C T G A A C T G T A C G A G C T A C T G G T A C A C G T G T A C G C T A A C T G A C T G
p-value:1e-19
log p-value:-4.584e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.5 +/- 21.8bp
Average Position of motif in Background79.0 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGCACCTCAGAG
TACCATAGCAACGGT---
 A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTGAGCACCTCAGAG
TATCATTAGAACGCT----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCTGAGCACCTCAGAG-
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGCACCTCAGAG
TTCCKNAGAA--------
 A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTGAGCACCTCAGAG
GTTGCCATGGCAAC------
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGCACCTCAGAG
CCGCATAGCAACGGA---
 A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCTGAGCACCTCAGAG
SCCTAGCAACAG----
 A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCTGAGCACCTCAGAG
CATTTCCTGAGAAAT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCTGAGCACCTCAGAG
-ATTAACACCT-----
 A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGCACCTCAGAG
WDNCTGGGCA--------
 A C G T A C G T A G T C A G T C C G A T A C T G G T C A A C T G G T A C C T G A A G T C A G T C A G C T T A G C C G T A A C T G C T G A C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T