Information for 4-ATCTTTTTAATAGCCT (Motif 5)

C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
Reverse Opposite:
C G T A C A T G A C T G G A T C A C G T C G T A C G A T G C A T C G T A C G T A C G T A C G T A C G T A C T A G C G T A C G A T
p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 23.1bp
Average Position of motif in Background10.9 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0056.1_Hoxa9/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT-
ANTAATTTTATGGCCGN
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT
-NNTTTTTCTTATNT-
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTTTTAATAGCCT
NTNAATTTTATTGNATT
 A C G T C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTTTTAATAGCCT
GNATTTTTTTTTTGANC--
 A C G T A C G T A C G T C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTTTTAATAGCCT
NNNNTTTTTTTTTNAAC--
 A C G T A C G T A C G T C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT
----TTTTTATTGC--
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT
-----TTTAATTGCN-
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT
-----TTTAAT-----
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT
----NTTTTATTACN-
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T
A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTTTTTAATAGCCT-
-NGANTTTTATGGCTCN
 C G T A A C G T G A T C C G A T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C A T G A G T C G A T C A C G T A C G T
A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T