Motif 30

Information for 16-TGCCATATGSCAT (Motif 30)

Reverse Opposite:

p-value:	1e-4
log p-value:	-9.845e+00
Information Content per bp:	1.685
Number of Target Sequences with motif	7.0
Percentage of Target Sequences with motif	2.86%
Number of Background Sequences with motif	185.1
Percentage of Background Sequences with motif	0.38%
Average Position of motif in Targets	50.5 +/- 23.0bp
Average Position of motif in Background	50.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)	1.0
Multiplicity (# of sites on avg that occur together)	1.57
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:	1
Score:	0.70
Offset:	0
Orientation:	reverse strand
Alignment:	TGCCATATGSCAT TGACAGCTGTCA-

NEUROD2/MA0668.1/Jaspar

Match Rank:	2
Score:	0.70
Offset:	1
Orientation:	forward strand
Alignment:	TGCCATATGSCAT -GCCATATGGT--

NEUROG2/MA0669.1/Jaspar

Match Rank:	3
Score:	0.69
Offset:	1
Orientation:	forward strand
Alignment:	TGCCATATGSCAT -AACATATGTC--

PKNOX2/MA0783.1/Jaspar

Match Rank:	4
Score:	0.68
Offset:	0
Orientation:	reverse strand
Alignment:	TGCCATATGSCAT TGACACCTGTCA-

PKNOX1/MA0782.1/Jaspar

Match Rank:	5
Score:	0.67
Offset:	0
Orientation:	reverse strand
Alignment:	TGCCATATGSCAT TGACACCTGTCA-

Atoh1/MA0461.2/Jaspar

Match Rank:	6
Score:	0.67
Offset:	1
Orientation:	forward strand
Alignment:	TGCCATATGSCAT -AACATATGTT--

TGIF1/MA0796.1/Jaspar

Match Rank:	7
Score:	0.67
Offset:	0
Orientation:	reverse strand
Alignment:	TGCCATATGSCAT TGACAGCTGTCA-

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:	8
Score:	0.66
Offset:	1
Orientation:	reverse strand
Alignment:	TGCCATATGSCAT -GCCAGCTGBTNB

Bhlha15/MA0607.1/Jaspar

Match Rank:	9
Score:	0.65
Offset:	2
Orientation:	forward strand
Alignment:	TGCCATATGSCAT --CCATATGT---

BHLHE22/MA0818.1/Jaspar

Match Rank:	10
Score:	0.63
Offset:	1
Orientation:	forward strand
Alignment:	TGCCATATGSCAT -ACCATATGTT--