Information for 3-RMTKMCAAARTGKTRT (Motif 3)

C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A G T C A A G T C C G T A A G C T A C G T A G C T A C G T A C T G C A G T G T C A C G T A A C T G A G C T
p-value:1e-16
log p-value:-3.834e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 21.2bp
Average Position of motif in Background52.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RMTKMCAAARTGKTRT
ARGAGGMCAAAATGW---
 A C G T A C G T C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:RMTKMCAAARTGKTRT------
-------NNNTGTTGTTGTTNG
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RMTKMCAAARTGKTRT
CAATTGCAAAAATAT--
 A C G T C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RMTKMCAAARTGKTRT
GGTGCCAAGT------
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RMTKMCAAARTGKTRT
-----TTRAGTGSYK-
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:RMTKMCAAARTGKTRT-
--GAACADWATGTTCTT
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T A C G T
A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RMTKMCAAARTGKTRT-
-----CAAGATGGCGGC
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RMTKMCAAARTGKTRT
-----TTAAGTGGT--
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RMTKMCAAARTGKTRT
RHTGWCAR--------
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RMTKMCAAARTGKTRT
-----TTAAGTGGN--
 C T G A G T A C A C G T A C G T G T A C A G T C C G T A C T G A C G T A C T G A A C G T A C T G A C G T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T