Information for 8-AGATGTTAATACG (Motif 16)

T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
Reverse Opposite:
G A T C A T C G A G C T C T G A A G C T A G C T C G T A G T C A G T A C C G T A A G C T G T A C A C G T
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.732
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.6 +/- 30.8bp
Average Position of motif in Background54.2 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGATGTTAATACG-
TAAGATTATAATACGG
 A C G T A C G T T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGATGTTAATACG
--ATATTAATTAA
 T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGATGTTAATACG
AGGTGTTAAT---
 T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGATGTTAATACG-
NNNTTTNTAATACNG
 A C G T T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGATGTTAATACG
----TTTAAT---
 T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGATGTTAATACG
-TATGCWAATBAV
 T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGATGTTAATACG--
NTNAATTTTATTGNATT
 A C G T A C G T T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGATGTTAATACG-
NANTATTATAATTNNN
 A C G T A C G T T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGATGTTAATACG
TCCAGATGTT------
 A C G T A C G T A C G T T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGATGTTAATACG
--NTTTTATGAC-
 T C G A A C T G C T G A A C G T C A T G A C G T A C G T C T G A C T G A A G C T C T G A A T G C C T A G
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T