p-value: | 1e-8 |
log p-value: | -1.895e+01 |
Information Content per bp: | 1.663 |
Number of Target Sequences with motif | 41.0 |
Percentage of Target Sequences with motif | 4.84% |
Number of Background Sequences with motif | 814.3 |
Percentage of Background Sequences with motif | 1.71% |
Average Position of motif in Targets | 45.8 +/- 30.4bp |
Average Position of motif in Background | 51.0 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0117.1_Nkx3-1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAAGTTCTTT--- NATTTAAGTACTTANNA |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAAGTTCTTT--- CNTTAAGTACTTAANG |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAAGTTCTTT--- NATTTAAGTACTTNAAA |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAAGTTCTTT--- ACTCCAAGTACTTGGAA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGTTCTTT TTAAGTGCTT- |
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POL005.1_DPE/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAAGTTCTTT GAAGATGTT- |
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ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAAGTTCTTT-- AGGGAAGTCATTTCT |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGTTCTTT NGAAGC----- |
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PB0058.1_Sfpi1_1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GAAGTTCTTT TTAAGAGGAAGTTA--- |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAAGTTCTTT-------- --ANTCCTTTGTCTNNNN |
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