Information for 9-TCTGCAATCT (Motif 12)

A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G G C T A C G A T A C G T A T C G A G T C C G T A C T A G C G T A
p-value:1e-9
log p-value:-2.227e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif124.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets53.1 +/- 25.3bp
Average Position of motif in Background50.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCTGCAATCT
GGTCTGGCAT--
 A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCAATCT
NATTGTGCAAT--
 A C G T A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAATCT-
AGATGCAATCCC
 A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCAATCT
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAATCT
TTATGCAAT--
 A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCAATCT--
AAGTCAGCANTTTTN
 A C G T A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCAATCT
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTGCAATCT-
---CCAATCAA
 A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCTGCAATCT---
---CAAATCACTG
 A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCAATCT
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T C A G T A G C G T C A G C T A C G A T A G T C C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T