Information for 1-HWGCCYYRGGGCW (Motif 1)

G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A
Reverse Opposite:
C G A T A C T G A T G C A G T C A G T C G A C T T C A G C T G A C T A G A C T G T A G C G C A T C G T A
p-value:1e-125
log p-value:-2.883e+02
Information Content per bp:1.584
Number of Target Sequences with motif382.0
Percentage of Target Sequences with motif45.10%
Number of Background Sequences with motif5744.8
Percentage of Background Sequences with motif12.06%
Average Position of motif in Targets52.4 +/- 22.1bp
Average Position of motif in Background50.5 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C/MA0524.2/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:forward strand
Alignment:HWGCCYYRGGGCW
-TGCCCCAGGGCA
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:HWGCCYYRGGGCW-
TTGCCCTAGGGCAT
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:HWGCCYYRGGGCW-
--GCCTCAGGGCAT
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.90
Offset:2
Orientation:forward strand
Alignment:HWGCCYYRGGGCW-
--SCCTSAGGSCAW
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:HWGCCYYRGGGCW
-TGCCCTNGGGCA
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:HWGCCYYRGGGCW
-TGCCCNGGGGCA
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-HWGCCYYRGGGCW-
ATTGCCTGAGGCGAA
 A C G T G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-HWGCCYYRGGGCW-
ATTCCCTGAGGGGAA
 A C G T G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-HWGCCYYRGGGCW-
ATTGCCTGAGGCAAT
 A C G T G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.81
Offset:1
Orientation:forward strand
Alignment:HWGCCYYRGGGCW
-CGCCTCAGGCA-
 G C A T C G T A A T C G A G T C A G T C G A C T A G T C C T G A C T A G A C T G A T C G T G A C G C T A
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T