Information for 5-TTGCCCCTGGCAATGA (Motif 8)

A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C G C T A A G C T A C G T A T C G A G T C A G T C G T C A A T C G A C T G A C T G A C T G A G T C T C G A G T C A
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.889
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.7 +/- 21.0bp
Average Position of motif in Background48.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTGCCCCTGGCAATGA
ATTGCCTCAGGCAAT--
 A C G T A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCCTGGCAATGA
NTNGCCTCAGGCNNN--
 A C G T A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCCTGGCAATGA
NTCGCCTCAGGCAAT--
 A C G T A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCCTGGCAATGA
NTCCCCTCAGGGANT--
 A C G T A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGCCCCTGGCAATGA
-CGCCTCAGGCA----
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGCCCCTGGCAATGA
CGCCCCCTGACA----
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGCCCCTGGCAATGA
-AGCCTCAGGCA----
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGCCCCTGGCAATGA
-AGCCTCAGGCA----
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTGCCCCTGGCAATGA
-----CTTGGCAA---
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGCCCCTGGCAATGA
--SCCTSAGGSCAW--
 A C G T A G C T A C T G A G T C A G T C T G A C A T G C A C G T A C T G A C T G T A G C C G T A T C G A C G A T A C T G C T G A
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T