Information for 4-AAAAATTATCCTATTT (Motif 5)

C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
Reverse Opposite:
T G C A G C T A C G T A A C G T C G T A C T A G A C T G T C G A C G A T C G T A G T C A A G C T C G A T A C G T A C G T C G A T
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.680
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 28.2bp
Average Position of motif in Background32.9 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAAATTATCCTATTT-
---TNTTATCTTATCTT
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAATTATCCTATTT
NNTNNCAATATTAG-------
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAATTATCCTATTT
NNTNNCAATATTAG-------
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAAAATTATCCTATTT
--AAATTAGCATAAT-
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:AAAAATTATCCTATTT----
----------CTATTTTTGG
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAAATTATCCTATTT
AAACMATTAN-------
 A C G T C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATTATCCTATTT
AANTTATTGTTCTNNA-
 A C G T C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAAAATTATCCTATTT
TATAATTATAATATTC
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAAAATTATCCTATTT
CCTAATTATC------
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAAAATTATCCTATTT
AACAATTTCAGTGTT-
 C G T A G T C A G T C A C G T A C T G A A C G T C G A T G C T A A C G T A G T C A G T C C G A T T G C A A C G T C G A T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T