Information for 4-CAATTAACTC (Motif 4)

G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
Reverse Opposite:
A T C G C T G A C A T G A G C T C G A T C T G A C G T A A C G T C G A T A C T G
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.845
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.8 +/- 24.4bp
Average Position of motif in Background46.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CAATTAACTC
CCAATTAA---
 A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAATTAACTC
GCCAATTAAC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CAATTAACTC
CCAATTAA---
 A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

ESX1/MA0644.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAATTAACTC
ACCAATTAAC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T C G A G A T C G A T C T C G A G T C A G A C T G A C T G C T A T C G A G T A C A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CAATTAACTC
NCCAATTANC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CAATTAACTC
CCAATTAG---
 A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAATTAACTC
ACCAATTAGC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAATTAACTC
GCCAATTAGC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CAATTAACTC
CAATTAA---
 G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAATTAACTC
CCCAATTAGC--
 A C G T A C G T G T A C C G T A G T C A A C G T A G C T C G T A C T G A G A T C A G C T A T G C
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T