p-value: | 1e-9 |
log p-value: | -2.142e+01 |
Information Content per bp: | 1.827 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.03% |
Number of Background Sequences with motif | 22.2 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 29.1 +/- 22.9bp |
Average Position of motif in Background | 58.6 +/- 31.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCCTGCAGGGCB GGCCYCCTGCTGDGH- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCCTGCAGGGCB CCCCCTGCTGTG-- |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 3 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCCTGCAGGGCB GACCCCCCGCTGTGC- |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCCTGCAGGGCB GACCCCCCGCTGCGC- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCCTGCAGGGCB GACCCCCCGCTGTG-- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCCTGCAGGGCB- TCNCCTGCTGNGNNN |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCCTGCAGGGCB--- NNNANTGCAGTGCNNTT |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCCCTGCAGGGCB --CCTGCTGAGH- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCCTGCAGGGCB- TNTCCTGCTGTGNNG |
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TFAP2A(var.3)/MA0872.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCCCTGCAGGGCB TGCCCNNAGGGCA |
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