Information for 8-CYTGKTAASARTT (Motif 7)

A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T
Reverse Opposite:
C G T A C G T A A G C T A C G T A T C G C G A T A C G T C G T A G T A C A G T C C G T A C T A G A C T G
p-value:1e-13
log p-value:-3.057e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 20.4bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CYTGKTAASARTT-
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CYTGKTAASARTT--
-NNCNNAACAATTNT
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CYTGKTAASARTT----
--NNNTAACAATTATAN
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CYTGKTAASARTT-----
-TNCNNAACAATTTTTNC
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CYTGKTAASARTT
-----NAACAAT-
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CYTGKTAASARTT
SCCTAGCAACAG--
 A C G T A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CYTGKTAASARTT-
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CYTGKTAASARTT-
NTTNAGAACAATTA
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CYTGKTAASARTT---
NNTNANAACAATTNNA
 A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CYTGKTAASARTT-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G A T C G T A C G T A A T G C G T C A C T G A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T