Information for 12-GCACACAGSAAGC (Motif 20)

A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
Reverse Opposite:
C T A G A G T C A C G T A C G T A T G C G A T C A C G T A C T G A C G T A C T G A G C T A C T G T A G C
p-value:1e-10
log p-value:-2.320e+01
Information Content per bp:1.810
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.3 +/- 29.2bp
Average Position of motif in Background46.9 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GCACACAGSAAGC
---AACAGGAAGT
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GCACACAGSAAGC-
----ACAGGAAGTG
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GCACACAGSAAGC
---NACAGGAAAT
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCACACAGSAAGC
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCACACAGSAAGC-
----ACAGGAAGTG
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCACACAGSAAGC
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCACACAGSAAGC
---AACCGGAAGT
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCACACAGSAAGC
CCAGACAG-----
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCACACAGSAAGC
---NACAGGAAAT
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCACACAGSAAGC
CCAGACRSVB---
 A T C G A G T C C T G A T A G C T C G A A G T C C G T A C T A G A T C G C G T A C G T A C T A G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T