Information for 6-AGCGACCTCC (Motif 11)

T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C
Reverse Opposite:
C T A G A T C G C T G A C T A G T C A G C G A T A T G C C T A G A T G C A C G T
p-value:1e-12
log p-value:-2.805e+01
Information Content per bp:1.714
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif198.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets61.0 +/- 26.2bp
Average Position of motif in Background49.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGCGACCTCC
--TGACCYCT
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCGACCTCC
-GTGACCTT-
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCGACCTCC--
GGCGACCACCGA
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCGACCTCC---
-GCGACCACCGAA
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCGACCTCC
--TGACCT--
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCGACCTCC
--TGACCTYA
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCGACCTCC---
-GCGACCACCGAA
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCGACCTCC--
AGAAATGACTTCCCT
 A C G T A C G T A C G T T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGCGACCTCC--
--TGACCTTGAT
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCGACCTCC-
-NTGACCTTGA
 T G C A A T C G A G T C A T C G G C T A A G T C A G T C A G C T A T G C A G T C A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A