Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-110 | -2.551e+02 | 0.0000 | 342.0 | 40.14% | 5114.8 | 10.57% | motif file (matrix) |
svg |
2 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-66 | -1.528e+02 | 0.0000 | 304.0 | 35.68% | 6067.3 | 12.54% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-66 | -1.527e+02 | 0.0000 | 448.0 | 52.58% | 12039.7 | 24.87% | motif file (matrix) |
svg |
4 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-50 | -1.165e+02 | 0.0000 | 67.0 | 7.86% | 288.0 | 0.59% | motif file (matrix) |
svg |
5 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-40 | -9.408e+01 | 0.0000 | 120.0 | 14.08% | 1540.7 | 3.18% | motif file (matrix) |
svg |
6 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-35 | -8.188e+01 | 0.0000 | 148.0 | 17.37% | 2585.6 | 5.34% | motif file (matrix) |
svg |
7 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-28 | -6.492e+01 | 0.0000 | 157.0 | 18.43% | 3352.4 | 6.93% | motif file (matrix) |
svg |
8 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-26 | -6.069e+01 | 0.0000 | 77.0 | 9.04% | 976.9 | 2.02% | motif file (matrix) |
svg |
9 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-25 | -5.768e+01 | 0.0000 | 39.0 | 4.58% | 224.6 | 0.46% | motif file (matrix) |
svg |
10 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-22 | -5.272e+01 | 0.0000 | 42.0 | 4.93% | 309.2 | 0.64% | motif file (matrix) |
svg |
11 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.288e+01 | 0.0000 | 117.0 | 13.73% | 3578.7 | 7.39% | motif file (matrix) |
svg |
12 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-8 | -1.991e+01 | 0.0000 | 106.0 | 12.44% | 3293.4 | 6.80% | motif file (matrix) |
svg |
13 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-8 | -1.965e+01 | 0.0000 | 24.0 | 2.82% | 307.4 | 0.64% | motif file (matrix) |
svg |
14 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-7 | -1.835e+01 | 0.0000 | 113.0 | 13.26% | 3699.4 | 7.64% | motif file (matrix) |
svg |
15 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-7 | -1.775e+01 | 0.0000 | 74.0 | 8.69% | 2091.2 | 4.32% | motif file (matrix) |
svg |
16 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-7 | -1.755e+01 | 0.0000 | 64.0 | 7.51% | 1706.3 | 3.53% | motif file (matrix) |
svg |
17 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-7 | -1.721e+01 | 0.0000 | 45.0 | 5.28% | 1015.8 | 2.10% | motif file (matrix) |
svg |
18 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-7 | -1.686e+01 | 0.0000 | 72.0 | 8.45% | 2058.9 | 4.25% | motif file (matrix) |
svg |
19 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-7 | -1.670e+01 | 0.0000 | 131.0 | 15.38% | 4632.2 | 9.57% | motif file (matrix) |
svg |
20 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-7 | -1.667e+01 | 0.0000 | 29.0 | 3.40% | 505.7 | 1.04% | motif file (matrix) |
svg |
21 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.628e+01 | 0.0000 | 93.0 | 10.92% | 2971.7 | 6.14% | motif file (matrix) |
svg |
22 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-6 | -1.562e+01 | 0.0000 | 49.0 | 5.75% | 1222.4 | 2.53% | motif file (matrix) |
svg |
23 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 85.0 | 9.98% | 2679.1 | 5.54% | motif file (matrix) |
svg |
24 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-6 | -1.441e+01 | 0.0000 | 65.0 | 7.63% | 1909.7 | 3.95% | motif file (matrix) |
svg |
25 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-6 | -1.401e+01 | 0.0000 | 62.0 | 7.28% | 1809.7 | 3.74% | motif file (matrix) |
svg |
26 |
| ETS(ETS)/Promoter/Homer | 1e-5 | -1.356e+01 | 0.0000 | 33.0 | 3.87% | 725.2 | 1.50% | motif file (matrix) |
svg |
27 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-5 | -1.334e+01 | 0.0000 | 24.0 | 2.82% | 436.8 | 0.90% | motif file (matrix) |
svg |
28 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-5 | -1.310e+01 | 0.0000 | 10.0 | 1.17% | 79.1 | 0.16% | motif file (matrix) |
svg |
29 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.267e+01 | 0.0000 | 46.0 | 5.40% | 1241.0 | 2.56% | motif file (matrix) |
svg |
30 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.253e+01 | 0.0000 | 112.0 | 13.15% | 4118.1 | 8.51% | motif file (matrix) |
svg |
31 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-5 | -1.233e+01 | 0.0001 | 45.0 | 5.28% | 1219.0 | 2.52% | motif file (matrix) |
svg |
32 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.228e+01 | 0.0001 | 108.0 | 12.68% | 3955.5 | 8.17% | motif file (matrix) |
svg |
33 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-5 | -1.207e+01 | 0.0001 | 59.0 | 6.92% | 1799.2 | 3.72% | motif file (matrix) |
svg |
34 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-5 | -1.199e+01 | 0.0001 | 126.0 | 14.79% | 4829.1 | 9.98% | motif file (matrix) |
svg |
35 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 19.0 | 2.23% | 323.9 | 0.67% | motif file (matrix) |
svg |
36 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.162e+01 | 0.0001 | 48.0 | 5.63% | 1374.8 | 2.84% | motif file (matrix) |
svg |
37 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.148e+01 | 0.0001 | 49.0 | 5.75% | 1422.5 | 2.94% | motif file (matrix) |
svg |
38 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-4 | -1.133e+01 | 0.0001 | 96.0 | 11.27% | 3486.5 | 7.20% | motif file (matrix) |
svg |
39 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-4 | -1.126e+01 | 0.0001 | 43.0 | 5.05% | 1194.4 | 2.47% | motif file (matrix) |
svg |
40 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-4 | -1.112e+01 | 0.0001 | 78.0 | 9.15% | 2687.9 | 5.55% | motif file (matrix) |
svg |
41 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.106e+01 | 0.0001 | 70.0 | 8.22% | 2338.4 | 4.83% | motif file (matrix) |
svg |
42 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.056e+01 | 0.0002 | 8.0 | 0.94% | 65.8 | 0.14% | motif file (matrix) |
svg |
43 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-4 | -1.041e+01 | 0.0003 | 43.0 | 5.05% | 1239.9 | 2.56% | motif file (matrix) |
svg |
44 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.031e+01 | 0.0003 | 40.0 | 4.69% | 1124.9 | 2.32% | motif file (matrix) |
svg |
45 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.013e+01 | 0.0003 | 42.0 | 4.93% | 1214.9 | 2.51% | motif file (matrix) |
svg |
46 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-4 | -1.005e+01 | 0.0003 | 99.0 | 11.62% | 3747.8 | 7.74% | motif file (matrix) |
svg |
47 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.972e+00 | 0.0004 | 51.0 | 5.99% | 1595.5 | 3.30% | motif file (matrix) |
svg |
48 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.850e+00 | 0.0004 | 64.0 | 7.51% | 2165.7 | 4.47% | motif file (matrix) |
svg |
49 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.785e+00 | 0.0004 | 36.0 | 4.23% | 993.9 | 2.05% | motif file (matrix) |
svg |
50 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.732e+00 | 0.0004 | 295.0 | 34.62% | 13797.1 | 28.51% | motif file (matrix) |
svg |
51 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -9.472e+00 | 0.0005 | 36.0 | 4.23% | 1009.7 | 2.09% | motif file (matrix) |
svg |
52 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.995e+00 | 0.0009 | 45.0 | 5.28% | 1405.2 | 2.90% | motif file (matrix) |
svg |
53 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.917e+00 | 0.0009 | 45.0 | 5.28% | 1410.2 | 2.91% | motif file (matrix) |
svg |
54 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-3 | -8.839e+00 | 0.0010 | 27.0 | 3.17% | 691.5 | 1.43% | motif file (matrix) |
svg |
55 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.757e+00 | 0.0010 | 77.0 | 9.04% | 2846.6 | 5.88% | motif file (matrix) |
svg |
56 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.512e+00 | 0.0013 | 97.0 | 11.38% | 3814.5 | 7.88% | motif file (matrix) |
svg |
57 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -8.503e+00 | 0.0013 | 46.0 | 5.40% | 1480.8 | 3.06% | motif file (matrix) |
svg |
58 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-3 | -8.480e+00 | 0.0013 | 36.0 | 4.23% | 1064.0 | 2.20% | motif file (matrix) |
svg |
59 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -8.221e+00 | 0.0017 | 43.0 | 5.05% | 1371.1 | 2.83% | motif file (matrix) |
svg |
60 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.730e+00 | 0.0027 | 35.0 | 4.11% | 1066.2 | 2.20% | motif file (matrix) |
svg |
61 |
| Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-3 | -7.396e+00 | 0.0037 | 8.0 | 0.94% | 104.6 | 0.22% | motif file (matrix) |
svg |
62 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.311e+00 | 0.0039 | 214.0 | 25.12% | 9931.9 | 20.52% | motif file (matrix) |
svg |
63 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-3 | -6.936e+00 | 0.0056 | 74.0 | 8.69% | 2890.5 | 5.97% | motif file (matrix) |
svg |
64 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.546e+00 | 0.0082 | 39.0 | 4.58% | 1317.6 | 2.72% | motif file (matrix) |
svg |
65 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.300e+00 | 0.0103 | 43.0 | 5.05% | 1515.0 | 3.13% | motif file (matrix) |
svg |
66 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.299e+00 | 0.0103 | 22.0 | 2.58% | 618.9 | 1.28% | motif file (matrix) |
svg |
67 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.885e+00 | 0.0151 | 7.0 | 0.82% | 104.2 | 0.22% | motif file (matrix) |
svg |
68 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.758e+00 | 0.0169 | 31.0 | 3.64% | 1026.2 | 2.12% | motif file (matrix) |
svg |
69 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-2 | -5.736e+00 | 0.0170 | 11.0 | 1.29% | 233.0 | 0.48% | motif file (matrix) |
svg |
70 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.690e+00 | 0.0176 | 16.0 | 1.88% | 414.4 | 0.86% | motif file (matrix) |
svg |
71 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.556e+00 | 0.0198 | 43.0 | 5.05% | 1579.5 | 3.26% | motif file (matrix) |
svg |
72 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -5.509e+00 | 0.0205 | 4.0 | 0.47% | 36.8 | 0.08% | motif file (matrix) |
svg |
73 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.411e+00 | 0.0223 | 102.0 | 11.97% | 4468.9 | 9.23% | motif file (matrix) |
svg |
74 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.384e+00 | 0.0226 | 19.0 | 2.23% | 546.4 | 1.13% | motif file (matrix) |
svg |
75 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -5.372e+00 | 0.0226 | 36.0 | 4.23% | 1277.9 | 2.64% | motif file (matrix) |
svg |
76 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.215e+00 | 0.0260 | 90.0 | 10.56% | 3894.5 | 8.05% | motif file (matrix) |
svg |
77 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -5.191e+00 | 0.0263 | 23.0 | 2.70% | 723.0 | 1.49% | motif file (matrix) |
svg |
78 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.180e+00 | 0.0263 | 40.0 | 4.69% | 1476.6 | 3.05% | motif file (matrix) |
svg |
79 |
| IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer | 1e-2 | -4.812e+00 | 0.0375 | 15.0 | 1.76% | 416.6 | 0.86% | motif file (matrix) |
svg |
80 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -4.737e+00 | 0.0399 | 22.0 | 2.58% | 709.9 | 1.47% | motif file (matrix) |
svg |
81 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.669e+00 | 0.0422 | 7.0 | 0.82% | 131.7 | 0.27% | motif file (matrix) |
svg |