Information for 7-RAGGTCGYGACCT (Motif 9)

T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A G C T G A T C T C A G A G T C T A C G T C G A A G T C A G T C G C A T A G C T
p-value:1e-12
log p-value:-2.936e+01
Information Content per bp:1.691
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif189.1
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets52.7 +/- 24.0bp
Average Position of motif in Background48.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RAGGTCGYGACCT-
GGGGCCGAGGCCTG
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RAGGTCGYGACCT
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RAGGTCGYGACCT
MKGGGYGTGGCC-
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RAGGTCGYGACCT
--GGGCGGGACC-
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:RAGGTCGYGACCT
-------TGACCT
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:RAGGTCGYGACCT--
-------TGACCTYA
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---RAGGTCGYGACCT-
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RAGGTCGYGACCT
AAGGGGGCGTGGCC-
 A C G T A C G T T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:RAGGTCGYGACCT-
------GTGACCTT
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RAGGTCGYGACCT
GGGGGCGGGGCC-
 T C G A C G T A A C T G A C T G A G C T A T G C T C A G A G T C C T A G T C G A A G T C A G T C A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T