Information for 4-TGACCYAGCCTGCCCC (Motif 8)

A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G C T A G C T A G T A G C C G T A A C T G C T A G A T G C C G A T C T G A A C T G C T A G A C G T A G T C G T C A
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.726
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 31.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCYAGCCTGCCCC
TGWCCTCARNTGACC-
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACCYAGCCTGCCCC-
TGACCTTTCGTGACCTT
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGACCYAGCCTGCCCC---
TGACCTAAAGTAACCTCTG
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TGACCYAGCCTGCCCC--
---------CTGCCCGCA
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGACCYAGCCTGCCCC-----
----TCACCCCGCCCCAAATT
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGACCYAGCCTGCCCC
TGACCTNTAGTAACCC
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGACCYAGCCTGCCCC-----
-----ATCCCCGCCCCTAAAA
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGACCYAGCCTGCCCC
TGACCT----------
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGACCYAGCCTGCCCC-
-----KGCCCTTCCCCA
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TGACCYAGCCTGCCCC--
---------ATGCCCACC
 A C G T A C T G G T C A G A T C G T A C A G C T G C T A T A C G G A T C G T A C A C G T A T C G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C