Information for 3-CGCCMTCTAGTGG (Motif 3)

G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
Reverse Opposite:
A T G C A G T C T G C A A T G C G A C T C T G A A C T G T C G A C A G T A C T G A C T G G A T C C T A G
p-value:1e-29
log p-value:-6.740e+01
Information Content per bp:1.702
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.7 +/- 25.5bp
Average Position of motif in Background49.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CGCCMTCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.91
Offset:-6
Orientation:forward strand
Alignment:------CGCCMTCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----CGCCMTCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGCCMTCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCCMTCTAGTGG
-GCCATCTGTT--
 G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGCCMTCTAGTGG
GCCGCCATCTTG---
 A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCMTCTAGTGG
GCNGCCATCTTG---
 A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCCMTCTAGTGG
-ACCATCTGTT--
 G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCCMTCTAGTGG-
CACCCCCGGGGGGG
 G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCCMTCTAGTGG
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T G A T C C T A G G T A C A G T C G T C A A G C T T A G C G A C T C T G A T A C G A C G T A C T G T A C G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T