Information for 13-TGACCTGACC (Motif 13)

C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C
Reverse Opposite:
C A T G A C T G A C G T A G T C T C G A T A C G C T A G A G C T A G T C G T C A
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.696
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.08%
Number of Background Sequences with motif1382.0
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets55.3 +/- 25.5bp
Average Position of motif in Background48.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACC
TGACCT----
 C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACC
TGACCTYA--
 C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTGACC--
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTGACC--
GATGACGTGGCANT
 A C G T A C G T C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGACCTGACC-
NGATGACGTGGCAN
 A C G T A C G T A C G T C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTGACC--
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGACCTGACC---
-----TGACCYCT
 C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACC--
TCACGTGACCGG
 C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTGACC-
GTGACGTCACCG
 A C G T C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGACCTGACC-------
TGTCGTGACCCCTTAAT
 C A G T C T A G T C G A G A T C A T G C A G C T C T A G T G C A G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T