Information for 1-HTGACCTYTG (Motif 1)

G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
Reverse Opposite:
T A G C G C T A T C G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A
p-value:1e-128
log p-value:-2.950e+02
Information Content per bp:1.788
Number of Target Sequences with motif331.0
Percentage of Target Sequences with motif39.08%
Number of Background Sequences with motif4159.3
Percentage of Background Sequences with motif8.60%
Average Position of motif in Targets50.8 +/- 24.3bp
Average Position of motif in Background51.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---HTGACCTYTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---HTGACCTYTG
CNNTTGACCTTTG
 A C G T A C G T A C G T G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---HTGACCTYTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:HTGACCTYTG
CTGACCTTTG
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:HTGACCTYTG
-TGACCYCT-
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:forward strand
Alignment:HTGACCTYTG---
-TGACCTTTNCNT
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:HTGACCTYTG
-TGACCTYA-
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:HTGACCTYTG
-TGACCT---
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:HTGACCTYTG
GTGACCTT--
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:HTGACCTYTG
NTGACCTTGA
 G C A T A C G T A C T G C G T A A G T C A G T C A G C T A G C T C G A T A T C G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A