Information for 3-TGCCACCTACHGG (Motif 9)

A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C T G A C G T C T G A A C T G A T C G C G A T A C T G A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.0 +/- 28.6bp
Average Position of motif in Background55.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGCCACCTACHGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------TGCCACCTACHGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGCCACCTACHGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCACCTACHGG
ATGCCAACC-----
 A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCCACCTACHGG
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCACCTACHGG
TGACACCT-----
 A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCACCTACHGG
ATGCCCACC-----
 A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCCACCTACHGG--
GGCCYCCTGCTGDGH
 A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCCACCTACHGG
TGTCANYT-----
 A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGCCACCTACHGG
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A T G C A G T C A G C T C G T A A G T C G C A T A C T G A C T G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T