Information for 8-GAATTATWARMAR (Motif 11)

A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
Reverse Opposite:
A G T C A C G T C A G T A G C T A C G T C G T A C G T A C A G T C G T A C G T A A C G T A C G T A G T C
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 31.7bp
Average Position of motif in Background47.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAATTATWARMAR
-AATTATT-----
 A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAATTATWARMAR-
GCTAATTATAATTATC
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAATTATWARMAR-
TATAATTATAATATTC
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAATTATWARMAR-
TTTAATTATAATTAAG
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAATTATWARMAR
AAAATTGTTATGAA
 A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAATTATWARMAR
TTAATNATTAAC--
 A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAATTATWARMAR
CCGTATTATAAACAA
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAATTATWARMAR
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

HNF1A/MA0046.2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAATTATWARMAR
AGTTAATGATTAACT-
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAATTATWARMAR
TAATTAATTAATAATTA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T G C T A A C G T C G A T C G T A C T G A G T C A C G T A C T A G
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A