Information for 8-AGCCATTGGCTTC (Motif 8)

C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A A T C G A G T C A G T C C G T A C G T A A C G T A T C G A C T G A T G C A C G T
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.1 +/- 23.6bp
Average Position of motif in Background33.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCCATTGGCTTC
-CCGATTGGCT--
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCCATTGGCTTC
ACTAGCCAATCA----
 A C G T A C G T A C G T C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGCCATTGGCTTC-
-----TTGACTTTT
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCCATTGGCTTC
--CCATTGTTTT-
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCCATTGGCTTC-
NNNCCATTGTGTNAN
 A C G T C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCCATTGGCTTC
--CCATTGTTYB-
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCATTGGCTTC---
-AGAAATGACTTCCCT
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C A C G T A C G T A C G T
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGCCATTGGCTTC
-----TTGGCA--
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCCATTGGCTTC
-NCCATTGTTY--
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCCATTGGCTTC
GGCCATTAAC---
 C G T A A T C G A G T C A T G C C G T A G C A T A C G T A C T G T C A G A T G C A C G T A G C T A G T C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T