Information for 5-AAAGAAGAGAATCCAG (Motif 7)

C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T C G C G T A A C G T C G A T T G A C A C G T A G T C A C G T A C G T A T G C C G A T A C G T G C A T
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.784
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 26.4bp
Average Position of motif in Background61.3 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAGAAGAGAATCCAG--
---TGACANARRCCAGRC
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AAAGAAGAGAATCCAG---
---------ATGCCAGACN
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAAGAAGAGAATCCAG
-CGGAAGTGAAAC---
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAGAAGAGAATCCAG
AAGATAAGATAACA---
 A C G T C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAAGAAGAGAATCCAG-
-AAACAGACAAAGGAAT
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AAAGAAGAGAATCCAG----
--YTAATTRAWWCCAGATGT
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAAGAAGAGAATCCAG-------
------NNNANTGCAGTGCNNTT
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAAGAAGAGAATCCAG----
------NNTAATCCNGNCNN
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AAAGAAGAGAATCCAG
AAAAAGTAAACAAAGAC-
 A C G T A C G T C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AAAGAAGAGAATCCAG
-GAGAACCGAAACTG-
 C G T A G T C A C G T A A T C G G T C A C G T A T C A G C G T A A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C T G
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T