Information for 11-GAGCCAACAG (Motif 17)

A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 17.2bp
Average Position of motif in Background47.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAACAG
CGTGCCAAG--
 A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGCCAACAG
-TGCCAA---
 A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GAGCCAACAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCAACAG
WAAGTAAAYA-
 A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAACAG
GGTGCCAAGT-
 A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGCCAACAG
--GTAAACAG
 A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCAACAG-
TATGTAAACANG
 A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCCAACAG---
---CCAACTGCCA
 A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCCAACAG
ATGCCAACC-
 A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCAACAG-------
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C