Information for 7-TCCAGCTGGG (Motif 11)

C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G
Reverse Opposite:
A G T C T A G C A G T C C G T A A C T G T G A C C G A T A C T G A T C G C G T A
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.831
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif248.1
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets49.3 +/- 27.1bp
Average Position of motif in Background50.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TCCAGCTGGG-
-HCAGCTGDTN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCCAGCTGGG--
NVCAGCTGBBNN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TCCAGCTGGG-
-VCAGCTGBNN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TCCAGCTGGG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TCCAGCTGGG-
-CCAGCTGTTN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCCAGCTGGG-
-GCAGCTGTNN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCCAGCTGGG-
-NCAGCTGCTG
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCCAGCTGGG-
-ACAGCTGTTN
 C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T
A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCTGGG---
TNTCCTGCTGTGNNG
 A C G T A C G T C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCTGGG
CCCCCTGCTGTG
 A C G T A C G T C G A T T A G C A G T C C G T A A C T G G T A C C G A T C T A G A T C G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G