Information for 3-RTGAVTCACC (Motif 2)

T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
Reverse Opposite:
C T A G T C A G C G A T T C A G C T G A A T G C G A C T G T A C T C G A A G C T
p-value:1e-56
log p-value:-1.305e+02
Information Content per bp:1.620
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif16.05%
Number of Background Sequences with motif1394.0
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets49.8 +/- 27.3bp
Average Position of motif in Background49.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS/MA0476.1/Jaspar

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RTGAVTCACC
NATGAGTCANN
 A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

FOSL1/MA0477.1/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RTGAVTCACC
NATGAGTCACC
 A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGAVTCACC
NNATGAGTCATN
 A C G T A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGAVTCACC-
DATGASTCATHN
 A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTGAVTCACC
ATGASTCATY
 T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTGAVTCACC-
ATGAGTCATCN
 T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RTGAVTCACC
NATGAGTCACN
 A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGAVTCACC-
NATGASTCABNN
 A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGAVTCACC-
NTGAGTCATCN
 T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C A C G T
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--RTGAVTCACC
NNATGASTCATH
 A C G T A C G T T C G A A G C T C A T G C T G A T A C G G A C T A G T C C G T A A G T C G A T C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C