Information for 10-TCCCTTGVAGTCA (Motif 10)

A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A G T C A G C T A C G T A G T C C T G A C G T A A C T G A T C G T A C G C G T A
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 22.1bp
Average Position of motif in Background41.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCCCTTGVAGTCA-
-----AAAAGTCAA
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCCTTGVAGTCA
-GSCTGTCACTCA
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TCCCTTGVAGTCA--
---------GTCATN
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TCCCTTGVAGTCA---
--------AGTCACGC
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCCCTTGVAGTCA
-----TGACGTCA
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCCTTGVAGTCA
-CCTTTGAWGT--
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCCTTGVAGTCA-
--NCTGTCAATCAN
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCCTTGVAGTCA-
--SCTGTCAVTCAV
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCCCTTGVAGTCA--
-----TGACGTCATC
 A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCCTTGVAGTCA
GGGTTACTANAGGTCA
 A C G T A C G T A C G T A C G T A T G C A T G C A G T C A C G T A G C T C T A G T C G A C T G A A C T G A C G T A G T C C G T A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A