Information for 8-CTGACCACAC (Motif 9)

A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C
Reverse Opposite:
C A T G A C G T A C T G G A C T A C T G A C T G G C A T A T G C C G T A A C T G
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.840
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif185.0
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets54.0 +/- 28.6bp
Average Position of motif in Background51.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTGACCACAC--
NWAACCACADNN
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGACCACAC
NAAACCACAG
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACCACAC-
-AAACCACAGC
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGACCACAC
-TGACCTYA-
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGACCACAC--
GCGACCACACTG
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGACCACAC
-TGACCYCT-
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGACCACAC--
-AAACCACAGAN
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTGACCACAC---
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCACAC---
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGACCACAC--
ATGACGTCAYYN
 A G T C A C G T A T C G C G T A T G A C A G T C C T G A A G T C C G T A G T A C A C G T A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G