Information for 13-CTTCACCCCG (Motif 20)

A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.082e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 21.4bp
Average Position of motif in Background66.2 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTCACCCCG----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTTCACCCCG----
NNCNTGACCCCGCTCT
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTTCACCCCG----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTCACCCCG-
CTTCACACCTA
 A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTTCACCCCG-----
AAATTCCCCCCGGAAGT
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTCACCCCG-
-ATCACCCCAT
 A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTCACCCCG-
-ATCACCCCAC
 A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTCACCCCG-
-TTCACACCTT
 A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTTCACCCCG-
-ATCACCCCAT
 A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTCACCCCG----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C