Information for 11-CCACGTGTCA (Motif 19)

A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A T C G
p-value:1e-5
log p-value:-1.343e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.2 +/- 23.4bp
Average Position of motif in Background36.6 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas2/MA0626.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGTCA
GGCACGTGTC-
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CCACGTGTCA---
GCACGTGTCNNNN
 A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CCACGTGTCA
-CACGTGDC-
 A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCACGTGTCA
GGCACGTGNC-
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CCACGTGTCA
GCACGTGT--
 A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CCACGTGTCA
-CACGTGNC-
 A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGTCA
NCCACGTG---
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGTCA
GCCACGTG---
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CCACGTGTCA
GGCACGTGTC-
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGTCA
GCCACGTGT--
 A C G T A T G C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T