Information for 8-TGSKGGCATTTTC (Motif 8)

A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C T G A C T G A C G T A A C G T A C T G A T G C A G T C G T C A A T G C A G T C C G T A
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 34.9bp
Average Position of motif in Background42.8 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
GGTTGGCAT----
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
-GCNGCCATCTTG
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
NGTGGGCAT----
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
---GGGAATTTCC
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGSKGGCATTTTC
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
-GCCGCCATCTTG
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGSKGGCATTTTC
---GGGAATTTCC
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGSKGGCATTTTC
TNNGGGCAG----
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGSKGGCATTTTC
---GGGGATTTCC
 A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGSKGGCATTTTC
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C T G A T C G A G T C C G T A A C G T G A C T A G C T A C G T A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T