Information for 10-MGCKGGTTAG (Motif 10)

G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T G T C A C G T A A G T C A G T C G T C A A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.907
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.2 +/- 30.0bp
Average Position of motif in Background59.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MGCKGGTTAG
AAGAGGATTAG
 A C G T G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:MGCKGGTTAG---
--CAGGTAAGTAT
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---MGCKGGTTAG----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MGCKGGTTAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:MGCKGGTTAG-
-GNGGATTAGN
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:MGCKGGTTAG-
--CAGGTGAGG
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:MGCKGGTTAG-
---GGATTAGC
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PH0097.1_Lhx6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---MGCKGGTTAG----
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MGCKGGTTAG-
-NNGGATTAGN
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MGCKGGTTAG
--CGGATTAN
 G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C T G
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A