Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-199 | -4.592e+02 | 0.0000 | 169.0 | 20.66% | 275.5 | 0.59% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-151 | -3.491e+02 | 0.0000 | 169.0 | 20.66% | 539.2 | 1.15% | motif file (matrix) |
svg |
3 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-87 | -2.010e+02 | 0.0000 | 147.0 | 17.97% | 980.2 | 2.09% | motif file (matrix) |
svg |
4 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-86 | -1.985e+02 | 0.0000 | 156.0 | 19.07% | 1161.6 | 2.47% | motif file (matrix) |
svg |
5 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-85 | -1.969e+02 | 0.0000 | 147.0 | 17.97% | 1012.0 | 2.15% | motif file (matrix) |
svg |
6 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-84 | -1.951e+02 | 0.0000 | 138.0 | 16.87% | 870.4 | 1.85% | motif file (matrix) |
svg |
7 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-83 | -1.929e+02 | 0.0000 | 155.0 | 18.95% | 1189.6 | 2.53% | motif file (matrix) |
svg |
8 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-81 | -1.873e+02 | 0.0000 | 163.0 | 19.93% | 1399.6 | 2.98% | motif file (matrix) |
svg |
9 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-76 | -1.763e+02 | 0.0000 | 116.0 | 14.18% | 645.7 | 1.37% | motif file (matrix) |
svg |
10 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-66 | -1.539e+02 | 0.0000 | 93.0 | 11.37% | 443.6 | 0.94% | motif file (matrix) |
svg |
11 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-37 | -8.710e+01 | 0.0000 | 63.0 | 7.70% | 403.9 | 0.86% | motif file (matrix) |
svg |
12 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-20 | -4.798e+01 | 0.0000 | 104.0 | 12.71% | 2073.8 | 4.41% | motif file (matrix) |
svg |
13 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-18 | -4.330e+01 | 0.0000 | 156.0 | 19.07% | 4182.1 | 8.90% | motif file (matrix) |
svg |
14 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-18 | -4.311e+01 | 0.0000 | 172.0 | 21.03% | 4847.1 | 10.32% | motif file (matrix) |
svg |
15 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.260e+01 | 0.0000 | 90.0 | 11.00% | 1761.1 | 3.75% | motif file (matrix) |
svg |
16 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-18 | -4.225e+01 | 0.0000 | 82.0 | 10.02% | 1511.1 | 3.22% | motif file (matrix) |
svg |
17 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.213e+01 | 0.0000 | 24.0 | 2.93% | 106.6 | 0.23% | motif file (matrix) |
svg |
18 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-16 | -3.795e+01 | 0.0000 | 20.0 | 2.44% | 77.8 | 0.17% | motif file (matrix) |
svg |
19 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-16 | -3.754e+01 | 0.0000 | 81.0 | 9.90% | 1608.3 | 3.42% | motif file (matrix) |
svg |
20 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.496e+01 | 0.0000 | 75.0 | 9.17% | 1485.0 | 3.16% | motif file (matrix) |
svg |
21 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-14 | -3.373e+01 | 0.0000 | 67.0 | 8.19% | 1258.4 | 2.68% | motif file (matrix) |
svg |
22 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-14 | -3.315e+01 | 0.0000 | 114.0 | 13.94% | 2968.8 | 6.32% | motif file (matrix) |
svg |
23 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.266e+01 | 0.0000 | 19.0 | 2.32% | 89.8 | 0.19% | motif file (matrix) |
svg |
24 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-12 | -2.982e+01 | 0.0000 | 47.0 | 5.75% | 743.0 | 1.58% | motif file (matrix) |
svg |
25 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-11 | -2.568e+01 | 0.0000 | 84.0 | 10.27% | 2133.1 | 4.54% | motif file (matrix) |
svg |
26 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.244e+01 | 0.0000 | 47.0 | 5.75% | 926.9 | 1.97% | motif file (matrix) |
svg |
27 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-9 | -2.169e+01 | 0.0000 | 29.0 | 3.55% | 405.9 | 0.86% | motif file (matrix) |
svg |
28 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-8 | -1.908e+01 | 0.0000 | 24.0 | 2.93% | 320.4 | 0.68% | motif file (matrix) |
svg |
29 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-7 | -1.784e+01 | 0.0000 | 27.0 | 3.30% | 425.2 | 0.91% | motif file (matrix) |
svg |
30 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-7 | -1.663e+01 | 0.0000 | 100.0 | 12.22% | 3289.3 | 7.00% | motif file (matrix) |
svg |
31 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.575e+01 | 0.0000 | 87.0 | 10.64% | 2781.1 | 5.92% | motif file (matrix) |
svg |
32 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.460e+01 | 0.0000 | 56.0 | 6.85% | 1555.7 | 3.31% | motif file (matrix) |
svg |
33 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.450e+01 | 0.0000 | 6.0 | 0.73% | 16.2 | 0.03% | motif file (matrix) |
svg |
34 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-6 | -1.383e+01 | 0.0000 | 212.0 | 25.92% | 8958.3 | 19.07% | motif file (matrix) |
svg |
35 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.350e+01 | 0.0000 | 46.0 | 5.62% | 1216.8 | 2.59% | motif file (matrix) |
svg |
36 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-5 | -1.341e+01 | 0.0000 | 30.0 | 3.67% | 635.6 | 1.35% | motif file (matrix) |
svg |
37 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.332e+01 | 0.0000 | 69.0 | 8.44% | 2165.1 | 4.61% | motif file (matrix) |
svg |
38 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.331e+01 | 0.0000 | 63.0 | 7.70% | 1912.8 | 4.07% | motif file (matrix) |
svg |
39 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.329e+01 | 0.0000 | 205.0 | 25.06% | 8668.1 | 18.45% | motif file (matrix) |
svg |
40 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.327e+01 | 0.0000 | 75.0 | 9.17% | 2427.9 | 5.17% | motif file (matrix) |
svg |
41 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.286e+01 | 0.0000 | 102.0 | 12.47% | 3672.0 | 7.82% | motif file (matrix) |
svg |
42 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.256e+01 | 0.0000 | 53.0 | 6.48% | 1542.4 | 3.28% | motif file (matrix) |
svg |
43 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.138e+01 | 0.0001 | 87.0 | 10.64% | 3107.4 | 6.62% | motif file (matrix) |
svg |
44 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-4 | -1.125e+01 | 0.0001 | 10.0 | 1.22% | 100.0 | 0.21% | motif file (matrix) |
svg |
45 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.117e+01 | 0.0001 | 18.0 | 2.20% | 311.3 | 0.66% | motif file (matrix) |
svg |
46 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.080e+01 | 0.0002 | 61.0 | 7.46% | 1988.6 | 4.23% | motif file (matrix) |
svg |
47 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-4 | -9.500e+00 | 0.0006 | 12.0 | 1.47% | 174.3 | 0.37% | motif file (matrix) |
svg |
48 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-4 | -9.347e+00 | 0.0007 | 104.0 | 12.71% | 4105.3 | 8.74% | motif file (matrix) |
svg |
49 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -8.913e+00 | 0.0010 | 30.0 | 3.67% | 811.6 | 1.73% | motif file (matrix) |
svg |
50 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -8.832e+00 | 0.0011 | 23.0 | 2.81% | 550.7 | 1.17% | motif file (matrix) |
svg |
51 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -8.796e+00 | 0.0011 | 88.0 | 10.76% | 3395.9 | 7.23% | motif file (matrix) |
svg |
52 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.736e+00 | 0.0011 | 181.0 | 22.13% | 8066.8 | 17.17% | motif file (matrix) |
svg |
53 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.562e+00 | 0.0013 | 52.0 | 6.36% | 1755.7 | 3.74% | motif file (matrix) |
svg |
54 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.534e+00 | 0.0013 | 71.0 | 8.68% | 2620.6 | 5.58% | motif file (matrix) |
svg |
55 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.453e+00 | 0.0014 | 43.0 | 5.26% | 1371.3 | 2.92% | motif file (matrix) |
svg |
56 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.187e+00 | 0.0018 | 39.0 | 4.77% | 1218.5 | 2.59% | motif file (matrix) |
svg |
57 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-3 | -8.075e+00 | 0.0020 | 13.0 | 1.59% | 234.7 | 0.50% | motif file (matrix) |
svg |
58 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -8.065e+00 | 0.0020 | 42.0 | 5.13% | 1354.3 | 2.88% | motif file (matrix) |
svg |
59 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.894e+00 | 0.0023 | 37.0 | 4.52% | 1152.5 | 2.45% | motif file (matrix) |
svg |
60 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.610e+00 | 0.0030 | 41.0 | 5.01% | 1342.9 | 2.86% | motif file (matrix) |
svg |
61 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -7.352e+00 | 0.0038 | 43.0 | 5.26% | 1448.1 | 3.08% | motif file (matrix) |
svg |
62 |
| E-box(bHLH)/Promoter/Homer | 1e-3 | -7.208e+00 | 0.0043 | 12.0 | 1.47% | 225.7 | 0.48% | motif file (matrix) |
svg |
63 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -7.196e+00 | 0.0043 | 23.0 | 2.81% | 620.8 | 1.32% | motif file (matrix) |
svg |
64 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.195e+00 | 0.0043 | 202.0 | 24.69% | 9433.9 | 20.08% | motif file (matrix) |
svg |
65 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-3 | -7.070e+00 | 0.0048 | 30.0 | 3.67% | 910.0 | 1.94% | motif file (matrix) |
svg |
66 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.855e+00 | 0.0058 | 129.0 | 15.77% | 5675.5 | 12.08% | motif file (matrix) |
svg |
67 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -6.775e+00 | 0.0062 | 15.0 | 1.83% | 339.5 | 0.72% | motif file (matrix) |
svg |
68 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.729e+00 | 0.0064 | 56.0 | 6.85% | 2092.0 | 4.45% | motif file (matrix) |
svg |
69 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.655e+00 | 0.0068 | 143.0 | 17.48% | 6428.5 | 13.69% | motif file (matrix) |
svg |
70 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.461e+00 | 0.0081 | 21.0 | 2.57% | 578.0 | 1.23% | motif file (matrix) |
svg |
71 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -6.374e+00 | 0.0087 | 20.0 | 2.44% | 542.7 | 1.16% | motif file (matrix) |
svg |
72 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.358e+00 | 0.0088 | 57.0 | 6.97% | 2174.9 | 4.63% | motif file (matrix) |
svg |
73 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -6.152e+00 | 0.0106 | 27.0 | 3.30% | 839.3 | 1.79% | motif file (matrix) |
svg |
74 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -6.148e+00 | 0.0106 | 96.0 | 11.74% | 4105.0 | 8.74% | motif file (matrix) |
svg |
75 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -6.132e+00 | 0.0106 | 30.0 | 3.67% | 968.1 | 2.06% | motif file (matrix) |
svg |
76 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -6.069e+00 | 0.0111 | 22.0 | 2.69% | 637.4 | 1.36% | motif file (matrix) |
svg |
77 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.022e+00 | 0.0115 | 15.0 | 1.83% | 367.2 | 0.78% | motif file (matrix) |
svg |
78 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -5.760e+00 | 0.0147 | 18.0 | 2.20% | 494.0 | 1.05% | motif file (matrix) |
svg |
79 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.701e+00 | 0.0154 | 49.0 | 5.99% | 1863.3 | 3.97% | motif file (matrix) |
svg |
80 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.688e+00 | 0.0154 | 114.0 | 13.94% | 5090.7 | 10.84% | motif file (matrix) |
svg |
81 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.569e+00 | 0.0171 | 44.0 | 5.38% | 1642.3 | 3.50% | motif file (matrix) |
svg |
82 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.520e+00 | 0.0178 | 13.0 | 1.59% | 313.6 | 0.67% | motif file (matrix) |
svg |
83 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.396e+00 | 0.0199 | 30.0 | 3.67% | 1020.9 | 2.17% | motif file (matrix) |
svg |
84 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.036e+00 | 0.0282 | 29.0 | 3.55% | 1003.9 | 2.14% | motif file (matrix) |
svg |
85 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -4.954e+00 | 0.0302 | 36.0 | 4.40% | 1328.4 | 2.83% | motif file (matrix) |
svg |
86 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.872e+00 | 0.0324 | 28.0 | 3.42% | 971.1 | 2.07% | motif file (matrix) |
svg |
87 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -4.682e+00 | 0.0387 | 25.0 | 3.06% | 852.7 | 1.82% | motif file (matrix) |
svg |
88 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -4.651e+00 | 0.0395 | 108.0 | 13.20% | 4958.2 | 10.56% | motif file (matrix) |
svg |