Information for 8-CCTTTGTTCT (Motif 7)

A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
Reverse Opposite:
G T C A C T A G T G C A T C G A A G T C G T C A C G T A C G T A C T A G C T A G
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.833
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif176.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets41.0 +/- 24.0bp
Average Position of motif in Background49.4 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGTTCT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCTTTGTTCT
YCTTTGTTCC
 A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGTTCT---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCTTTGTTCT
CCTTTGTTTT
 A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCTTTGTTCT
NCCATTGTTC-
 A C G T A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CCTTTGTTCT
CCTTTGTT--
 A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CCTTTGTTCT---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCTTTGTTCT
CCATTGTTTT
 A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCTTTGTTCT--
CCTTTGATCTTT
 A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGTTCT--
AACCCTTTGATCTTT
 A C G T A C G T A C G T A G T C A G T C G C A T A C G T C A G T A C T G A G C T A C G T A G T C C A G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T