Information for 4-CDCCACGTGN (Motif 3)

T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
Reverse Opposite:
T A C G A G T C C G T A A T G C T C A G A G C T A C T G C A T G G A T C A T C G
p-value:1e-27
log p-value:-6.222e+01
Information Content per bp:1.654
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif16.01%
Number of Background Sequences with motif2574.9
Percentage of Background Sequences with motif5.48%
Average Position of motif in Targets50.4 +/- 18.7bp
Average Position of motif in Background51.0 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN---
-ACCACGTGGTNN
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C A C G T A C G T A C G T
A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN
-NCCACGTG-
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN
-GCCACGTG-
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN
-GNCACGTG-
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CDCCACGTGN
NNCCACGTGG
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN
-NVCACGTG-
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

MAX/MA0058.3/Jaspar

Match Rank:7
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN-
-ACCACGTGCT
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CDCCACGTGN
NNCCACGTGG
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN
-GHCACGTG-
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CDCCACGTGN-
-ACCACGTGCC
 T A G C C T A G G T A C A G T C C T G A A G T C T A C G A C G T A C T G A T G C A C G T
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C