Information for 11-CTATTAAACG (Motif 17)

A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
Reverse Opposite:
G T A C C A T G A C G T A C G T A C G T C G T A C G T A C G A T C G T A A C T G
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.873
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.9 +/- 32.2bp
Average Position of motif in Background44.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CTATTAAACG
--ATTAAA--
 A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTATTAAACG
NGCAATTAAA--
 A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTATTAAACG--
--GCTAAACGGT
 A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTATTAAACG
CAATTAA---
 A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTATTAAACG
ACTAATTAAA--
 A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTATTAAACG
NNCAATTANN--
 A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATTAAACG
GCAATTAG---
 A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTATTAAACG
GNCTATAAAAGG
 A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATTAAACG
CCAATTAA---
 A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATTAAACG
CTAATTAA---
 A C G T A G T C A C G T C G T A A C G T A C G T C G T A G T C A C G T A G T A C C A T G
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T