Information for 2-AGAAGGGCCGAGCTCC (Motif 3)

C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
Reverse Opposite:
A C T G T A C G C G T A A C T G A G T C A C G T A G T C C A T G A C T G A T G C A G T C A G T C A C G T A C G T A T G C A C G T
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 17.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
-RGKGGGCGGAGC---
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
-AGGGGGCGGGGCTG-
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
---GAGSCCGAGC---
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAAGGGCCGAGCTCC
--CAGGCCNNGGCCNN
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
--TAGGGCAAAGGTCA
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAAGGGCCGAGCTCC
NNVDGGGYGGGGCYN-
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
--GAGGTCAAAGGTCA
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAAGGGCCGAGCTCC
--GGGGGCGGGGCC--
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGGGCCGAGCTCC
NNAGGGACAAGGGCNC------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAAGGGCCGAGCTCC
-AGGGGTCAGAGGTCA
 C G T A A T C G G T C A C G T A A C T G A C T G A T C G A G T C G A T C A C T G C G T A A C T G A G T C A C G T A G T C G T A C
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A