Information for 5-AACCACAAATCACCTC (Motif 5)

T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
Reverse Opposite:
A C T G C G T A C T A G A C T G C A G T T C A G G T C A G A C T C G A T A C G T T A C G A C G T A C T G C A T G C G A T A C G T
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.663
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.2 +/- 26.9bp
Average Position of motif in Background48.4 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-3.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAATCACCTC
AAACCACANN-------
 A C G T T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACCACAAATCACCTC
-GCCATAAATCA----
 T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCACAAATCACCTC
NWAACCACADNN------
 A C G T A C G T T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAATCACCTC
AAACCGCAAA-------
 A C G T T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACCACAAATCACCTC
NAAACCACAG--------
 A C G T A C G T T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAAATCACCTC
AAACCACAGAN------
 A C G T T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACCACAAATCACCTC------
--CCCCAAACCACCCCCCCCCA
 T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACCACAAATCACCTC
GGCCATAAATCA----
 T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACCACAAATCACCTC
GGCCATAAATCAC---
 T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACCACAAATCACCTC
GGCCATAAATCA----
 T C G A G C T A G T A C A G T C G T C A A T G C T G C A C G T A C T G A C A G T A G T C G C T A G T A C A G T C C G A T T A G C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T