Information for 15-GAGACTTTGTTAC (Motif 23)

A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
Reverse Opposite:
A C T G A C G T C T G A C G T A A G T C G C T A C G T A C G T A A C T G A C G T A G T C A G C T A G T C
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 12.6bp
Average Position of motif in Background56.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAGACTTTGTTAC--
GHWACAWTGTWDCWA
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGACTTTGTTAC
YDGHTACAWTGTADC
 A C G T A C G T A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGACTTTGTTAC
----CTTTGT---
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGACTTTGTTAC
---YCTTTGTTCC
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAGACTTTGTTAC-------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGACTTTGTTAC
---CCWTTGTYYB
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGACTTTGTTAC
AGGVNCCTTTGT---
 A C G T A C G T A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGACTTTGTTAC---
TNNTCCTTTGTTCTNNT
 A C G T A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGACTTTGTTAC---
-TACCCTAGTTACCGA
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C A C G T A C G T A C G T
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGACTTTGTTAC
---CCTTTGTT--
 A C T G C T G A A C T G C G T A A G T C A C G T A C G T C A G T A C T G A C G T A G C T G T C A A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T